Yes.
Three heavyweights in the field behind the invention of TruT™
Ravi Jasuja, Shalender Bhasin, and Mikhail N Zakharov.
Shalender Bhasin
*using our ensemble allostery model we have turned that into an algorithm (cFTZ)
TruT™algorithm (cFTZ): device (calculator/data processing module) which computes FT using the algorithm.
*Our patent-protected, novel TruT™ companion diagnostic framework provides an accurate determination of free testosterone concentrations
The technology described herein is directed to the diagnosis and treatment of sex hormone disorders and/or deficiencies, such as estrogen and/or testosterone disorders and/or deficiencies.
patents.justia.com
[0006] In one aspect, described herein is a computer-implemented method for an assay, comprising: on a device having one or more processors and a memory storing one or more programs for execution by the one or more processors, the one or more programs including instructions for:
a) receiving data from measuring i) a total SHBG concentration, ii) a total testosterone concentration, and iii) a total albumin concentration in a biological sample obtained from an individual, to determine free testosterone concentration from the individual; b) attributing at least two distinct interconverting microstates of an unliganded SHBG dimer having a first monomer and a second monomer, and c) calculating the free testosterone concentration in the individual using the New Multi-Step Dynamic Binding Model with Complex Allostery encompassing readjustment of a first equilibria between the microstates upon binding of a first testosterone molecule to the first monomer and an allosteric interaction between two binding sites of the SHBG dimer.
[0018] In one aspect, described herein is a method for determining a need for adjustment of a dose of testosterone administered to an individual comprising a) determining the concentration of free testosterone in an individual receiving testosterone therapy at a first dose, wherein the concentration of free testosterone is determined by b) measuring i) a total SHBG concentration, ii) a total testosterone concentration, and iii) a total albumin concentration in a biological sample obtained from an individual, to determine free testosterone concentration from the individual; c) attributing at least two distinct interconverting microstates of an unliganded SHBG dimer having a first monomer and a second monomer by applying the New Multi-Step Dynamic Binding Model with Complex Allostery to the data of steps a) and b); d) calculating the free testosterone concentration in the individual using the New Multi-step Dynamic Binding Model with Complex Allostery encompassing readjustment of a first equilibria between the microstates upon binding of a first testosterone molecule to the first monomer and an allosteric interaction between two binding sites of the SHBG dimer; e) providing a second dose of testosterone that is higher than the first dose when the free testosterone concentration is below the lower end of the target therapeutic range (e.g.164 pg/ml); and f) providing a second dose of testosterone that is lower than the first dose when the free testosterone concentration is above the upper end of the target therapeutic range (314 pg/ml).
[0019] In some embodiments of any of the foregoing aspects, the step of attributing can be performed according to Figures 2, 3, 5, and 7. In some embodiments, of any of the foregoing aspects, the step of calculating can be performed according to Figure 7 or Example 5. In some embodiments of any of the foregoing aspects, the individual is a male over the age of 35. In some embodiments of any of the foregoing aspects, the androgen disorder is selected from the group consisting of a testosterone deficiency, an androgen deficiency, a hyperandrogenic disorder, an androgen expressing tumor, and a hypogonadism disorder. In some embodiments of any of the foregoing aspects, the androgen disorder is a hyperandrogenic disorder selected from the group consisting of an acne disorder, a hirsutism disorder, and an androgenic alopecia disorder. In some embodiments of any of the foregoing aspects, the individual has been diagnosed with a disease selected from the group consisting of diabetes, human immunodeficiency virus (HIV), hepatitis B, hepatitis C, hypothyroidism or hyperthyroidism, androgen insensitivity, acromegaly, anorexia, muscular dystrophy, liver disease, cancer cachexia, malnutrition, nephrotic syndrome, and obesity, and other conditions in which SHBG or albumin concentrations are altered. In some embodiments of any of the foregoing aspects, the assay, method, system, or medium can further comprise the step of classifying the individual into categories based on additional clinical symptoms. In some embodiments of any of the foregoing aspects, the assay, method, system, or medium can further comprise the step of using the free testosterone concentration determined using the new Multistep Dynamic Binding Model with Complex Allostery to determine the dose or to individually adjust the dose of a formulation of testosterone for the treatment of a medical disease, taking into account patient's age, body weight and body mass index, medical conditions, including any co-morbid conditions, albumin and SHBG, and/or LH and FSH concentrations, and other patient-specific factors. In some embodiments of any of the foregoing aspects, instead of steps a-c, the data received is a previously calculated concentration of free testosterone.
[0029] Fig. 10 depicts a schematic of the control of testosterone levels.
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[0030] Fig. 11 depicts a schematic of an exemplary system of determining free testosterone levels and/or dosages.
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[0031] Fig. 12 depicts a device or a computer system 1000 comprising one or more processors 1300 and a memory 1500 storing one or more programs 1600 for execution by the one or more processors 1300.
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EXAMPLE 5
[00217]
Binding proteins (e.g. SHBG, albumin, orosomucoid, and transcortin) and testosterone (T) dynamically interact in multiple steps to regulate testosterone availability.
[00218]
Circulating testosterone is bound mostly to plasma proteins, sex-hormone binding globulin (SHBG), and albumin. There are several states in which the testosterone and binding proteins are distributed. They continually re-partition into a series of states that are in conformational equilibria. The populations of the intermediate states redistribute as the concentrations of testosterone and binding proteins change. In one of its embodiments (as an example), SHBG exists in two distinct states in the solution governed by a unimolecular equilibrium constant. Both states are capable of binding T and upon binding T, they proceed to the corresponding states with one monomer bound to T and the other monomer is unoccupied within the dimer. The binding of first T induces allosteric changes in monomer that is still unoccupied and therefore results in a distinct change in affinity for the second molecule of T for the SHBG dimer. Consistent with the crystal structure of liganded SHBG, Binding of the second molecule to either of the intermediates results in the identical state of fully occupied SHBG dimer.
[00219]
In one embodiment, free testosterone is calculated as described below.
[00220]
The relative population of the intermediates is closely coupled through the multiple equilibria and dynamically readjust. Accordingly, testosterone's binding to SHBG cannot be described as a simple linear equation of ligand binding equilibrium. Described herein is a multi-species allostery model, e.g., in Lab VIEW framework, that fits the experimental data and permits the development of a set of parameters that accurately described the multiple interactions listed below:
[00221]
Using a set of equilibrium constants derived from the fits to the biophysical data provided in Figs. 5A, 5B, and 5C, an exemplary solution of the series of equations is presented below to calculate free T. The solution below doesn't imply presence of a unique equation rather that distinct equations can be developed to achieve accurate calculation of free T with a model of interaction that involves (and is not limited to) inter-subunit allostery in SHBG, regulation of free T levels by albumin and conformational states of binding proteins (albumin and SHBG).
[00222] Tf*(4311602270490*T_0-792951348000*S_0+95385510*Alb0-5341588560000)+Tf^2*(916102610798*T_0-210702480309*S_0+153989202*Alb0- 8623204540980)+Tf^3*(18366076550*T_0-22591273900*S_0+32723450*Alb0-1832205221596)+Tf^4*(1539342900*T_0-3079192900*S_0+657100*Alb0-36732153100)+2670794280000 *T_0+Tf^5*( 55000*T_0+110000*S_0+55000*Alb0-3078685800)+110000*Tf^6=0
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